LIFE
DPB


@
TRAP-LABS, the green branch of  
A Danish National Research Foundation Centre of Excellence
The Transport Physiology Laboratories (TRAP-labs) are focused on studying pump proteins in the biological membranes of higher plants. We are investigating the structure, function and regulation of pumps at the molecular, cellular and whole plant level. We use a combination of tools derived from molecular genetics, biochemistry, structural biology and physiology.

We host the P-type ATPase database (patbase).

Plant proton pump
(1997)

 

Plant proton pump
(2007)


Specialepladser tilbydes
Master projects

Animated movies
See pumps in action!
Toyoshima & Nomura (2002) Nature 418:605

Group Leaders

Morten J. Buch-Pedersen
 Associate Professor, PhD.
Anja Thoe Fuglsang
Associate Professor, PhD
Rosa Lopez
 Associate Professor, PhD.
Michael G. Palmgren
 Professor, PhD, D.Sc.
Thomas Guenther-Pomorski
Associate Professor, PhD.
Alexander Schulz
Professor, PhD, Dr.rer.nat.habil.
Research

PUMPKIN
Plant Physiology and Anatomy Laboratory - Photo album
Department of Plant Biology and Biotechnology
Faculty of Life Sciences - University of Copenhagen
Teaching

Absalon - Punkt KU
Campusnet
Courses at Department of Plant Biology
Consortia

Phosphoproteomics
PHIME
FOBI
Seminars

FRIMS (Friday Morning Plant Seminars)
FNU ekstranet







About us
Localization of gene activity of the lipid pump ALA3 in roots of the model plant Arabidopsis

 Bioimaging We are developing new methods for bioimaging of plants. Check the Schulz homepage for movies of living plant cells

Specialepladser tilbydes
Projektforslag
Arabidopsis

P-type ATPase database, Genevestigator, RIKEN RARGE Site, Arabidopsis Membrane Protein Library, PhosPhAt (a database of phosphorylation sites in Arabidopsis), TAIR Genome Structural Annotation, TAIR BLAST, GARNet, PlantsP (blast Arabidopsis and other plant genomes), PlantsT (functional genomics of transporters), MIPS, RNAi knockouts, Salk insertions, Insertion database, CSH Genetrap Website, Joe Ecker Arabidopsis gene collection
Yeast

EUROSCARF, The yeast transformation home page, MIPS CYGD, Yeast phenotype catalog, SGD, Yeast Global Microarray Viewer

Molecules

BioWiki, Tools for sequence analysis, ExPASY, SLC Tables , ELM - Functional sites in proteins , Buffers, NCBI, Molecular databases, Predict Protein Server, ClustalW, BOXSHADE, Membrane protein resources, SCAMPI server (prediction of TM helices), TMHMM server (prediction of TM helices), Plant Stress....
Structures

Membrane protein structures, PDB, AHA2 E1, SERCA1a E1, SERCA1a E2
Literature

Databases
ISI Web of Science, ISI Journal Citation Reports, Faculty of 1000

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Journals
Electronic journals online at DVJB and DNLB, Annu Rev Plant Biol, Biochemistry, Curr. Opin. Plant Biol., EMBO J., FEBS Lett., JBC, JCB, J. Cell Sci., JMB, MBC, MGG, Nature, Physiol. Plant., Planta, Plant Cell, Plant Cell Physiol., Plant J., PMB, Plant Physiol., PNAS, Science, TiBS, TiPS, ....